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Table 4 Antimicrobial profile and amino acid types in QRDRs and PMQRs analysis of S. dysentery with resistance to fluoroquinolones

From: Epidemic and molecular characterization of fluoroquinolone-resistant Shigella dysenteriae 1 isolates from calves with diarrhea

Strain name Antimicrobial profile QRDRs PMQR ST PT
gyrA parC aac(6′)-Ib-cr qnr qepA
83 (S) 87 (D) 80 (S) 83 (S)
SD020 RT1 ENR/KZ/CRO/CTX L D I L + – – 57 15
SD002 RT2 NOR/OFX/KZ/E/C/TE/S/CN L D S L + – – 229 6
SD026 RT2 NOR/OFX/KZ/E/C/TE/S/CN L D S L + – – 229 6
SD036 RT2 NOR/OFX/KZ/E/C/TE/S/CN L D S L + – – 229 7
SD015 RT3 ENR/LEV/CIP/ CRO/CTX/E/TE/CN L D S L + – – 228 23
SD016 RT3 ENR/LEV/CIP/ CRO/CTX/E/TE/CN L D S L + – – 228 25
SD004 RT4 ENR/LEV/CIP/ KZ/CRO/CTX/E/TE/CN L D S L + – – 228 28
SD007 RT4 ENR/LEV/CIP/ KZ/CRO/CTX/E/TE/CN L D S L + – – 228 26
SD008 RT4 ENR/LEV/CIP/ KZ/CRO/CTX/E/TE/CN L D S L + qnrB – 228 26
SD012 RT4 ENR/LEV/CIP/ KZ/CRO/CTX/E/TE/CN L D S L + – – 228 26
SD014 RT4 ENR/LEV/CIP/ KZ/CRO/CTX/E/TE/CN L D S L + – – 228 27
SD019 RT4 ENR/LEV/CIP/ KZ/CRO/CTX/E/TE/CN L D S L + – – 228 22
SD023 RT4 ENR/LEV/CIP/ KZ/CRO/CTX/E/TE/CN L D S L + qnrB – 228 22
SD024 RT4 ENR/LEV/CIP/ KZ/CRO/CTX/E/TE/CN L D S L + – – 228 21
SD029 RT4 ENR/LEV/CIP/ KZ/CRO/CTX/E/TE/CN L D S L + – – 228 20
SD030 RT4 ENR/LEV/CIP/ KZ/CRO/CTX/E/TE/CN L D S L + – – 228 24
SD035 RT4 ENR/LEV/CIP/ KZ/CRO/CTX/E/TE/CN L D S L + – – 228 23
SD001 RT5 NOR/ENR/LEV/CIP/OFX/ KZ/CRO/CTX/E/C/TE/S/CN L N I L + – + 229 8
SD006 RT5 NOR/ENR/LEV/CIP/OFX/ KZ/CRO/CTX/E/C/TE/S/CN L N I L + – – 229 8
SD009 RT5 NOR/ENR/LEV/CIP/OFX/ KZ/CRO/CTX/E/C/TE/S/CN L N I L + – – 229 8
SD011 RT5 NOR/ENR/LEV/CIP/OFX/ KZ/CRO/CTX/E/C/TE/S/CN L N I L + – – 229 9
SD013 RT5 NOR/ENR/LEV/CIP/OFX/ KZ/CRO/CTX/E/C/TE/S/CN L N I L + – – 229 8
SD017 RT5 NOR/ENR/LEV/CIP/OFX/ KZ/CRO/CTX/E/C/TE/S/CN L N I L + – – 229 8
SD018 RT5 NOR/ENR/LEV/CIP/OFX/ KZ/CRO/CTX/E/C/TE/S/CN L N I L + – – 229 10
SD022 RT5 NOR/ENR/LEV/CIP/OFX/ KZ/CRO/CTX/E/C/TE/S/CN L N I L + qnrS – 229 6
SD028 RT5 NOR/ENR/LEV/CIP/OFX/ KZ/CRO/CTX/E/C/TE/S/CN L N I L + qnrS – 229 4
SD031 RT5 NOR/ENR/LEV/CIP/OFX/ KZ/CRO/CTX/E/C/TE/S/CN L N I L + qnrS – 229 3
SD032 RT5 NOR/ENR/LEV/CIP/OFX/ KZ/CRO/CTX/E/C/TE/S/CN L N I L + qnrS – 229 1
SD034 RT5 NOR/ENR/LEV/CIP/OFX/ KZ/CRO/CTX/E/C/TE/S/CN L N I L + qnrS – 229 2
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BMC Microbiology

ISSN: 1471-2180

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